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Forsyth Bioinformatics Core

Location: The Forsyth Institute 140 The Fenway, Boston MA, 02115

Core Summary:

The Forsyth Bioinformatics Core specializes in oral microbial genomics and microarray gene expression analyses through the integration of computer science with molecular biology and genetics. In addition to supporting funded bioinformatics projects, the Bioinformatics Core will also provide computational support to Forsyth and other CATALYST researchers for processing, analyzing, and interpreting biological data.

Categories and Institutions:
  • Categories
  • Bioinformatics
  • Institutions
  • Forsyth Institute
Services:
  • Batch Blast Service

  • Consultation on analysis of other bioinformatics data

  • Custom microbial genome annotation (full, partial or survey genomic sequences)

  • GCG / EMBOSS Molecular Biology Software Package

  • High-density microbial genomic tiling array design for transcriptome studies

  • Microarray Data Analysis

  • Proteomic Data Analysis

  • Public web tool - Significance Analysis for Oral Pathogen Microarray Data (SAOPMD) http://www.brop.org/saopmd

  • Public web tool - The Bioinformatics Resource for Oral Pathogens (BROP) http://www.brop.org

  • Public web tool - The Genomic Signature Database (GSD) http://bioinformatics.forsyth.org/gsd

  • Public web tool - The Human Oral Microbe Identification Microarray Data Analysis (HOMIM) http://bioinformatics.forsyth.org/homim

  • Public web tool - The Human Oral Microbiome Database (HOMD) http://www.homd.org


Getting Started:

Please contact Dr. Tsute Chen if you have any question, request, or comment.


Departmental Web Link:

http://bioinformatics.forsyth.org/

Last updated: 2009-02-03T22:53:00Z